mesh_base_mod::mesh_base Type Reference

mesh data structure More...

Inheritance diagram for mesh_base_mod::mesh_base:

Collaboration diagram for mesh_base_mod::mesh_base:

Variables
class(geometry_base), allocatable	geometry
	geometrical properties More...
type(fargo_base)	fargo
	fargo transport properties More...
type(selection_base)	without_ghost_zones
	for masking part of comp. domain More...
integer	gnum
	number of ghost cells More...
integer	ginum
integer	gjnum
integer	gknum
	number of ghost cells in any direction More...
integer	inum
integer	jnum
integer	knum
	resolution More...
integer	imin
integer	imax
	minimal & maximal index in x-direction More...
integer	jmin
integer	jmax
	minimal & maximal index in y-direction More...
integer	kmin
integer	kmax
	minimal & maximal index in z-direction More...
integer	igmin
integer	igmax
	minimal & maximal index in x-direction with ghost cells More...
integer	jgmin
integer	jgmax
	minimal & maximal index in y-direction with ghost cells More...
integer	kgmin
integer	kgmax
	minimal & maximal index in z-direction with ghost cells More...
integer	ndims
	dimensionality of the mesh: 1 (1D), 2 (2D), 3 (3D) More...
integer	nfaces
	amount of faces, 2 (1D), 4 (2D), 6 (3D) More...
integer	ncorners
	amount of corners, 2 (1D), 4 (2D), 8 (3D) More...
integer	ip1
integer	ip2
integer	im1
integer	im2
	access indices, which might become zero without x-dim More...
integer	jp1
integer	jp2
integer	jm1
integer	jm2
	access indices, which might become zero without y-dim More...
integer	kp1
integer	kp2
integer	km1
integer	km2
	access indices, which might become zero without z-dim More...
real	xmin
real	xmax
	spatial extent of computational domain in x-direction More...
real	ymin
real	ymax
	spatial extent of computational domain in y-direction More...
real	zmin
real	zmax
	spatial extent of computational domain in z-direction More...
real	dx
real	dy
real	dz
	curvilinear spatial differences More...
real	invdx
real	invdy
real	invdz
	inverse of curvilinear spatial differences More...
real	omega
	speed of the rotating frame of ref. More...
real	q
	shearing parameter More...
integer	shear_dir
	Enables shearingbox with shear direction (0 disabled, 1 or 2 enabled) More...
integer	rotsym
	assume rotational symmetry (> 0 enabled, contains index of azimuthal angle) More...
integer	vector_components
	enabled vector components More...
real, dimension(3)	rotcent
	center of the rotating frame of ref. More...
cell coordinates
type(marray_cellvector)	curv
	curvilinear coordinates More...
type(marray_cellvector)	cart
	cartesian coordinates More...
real, dimension(:,:,:,:), pointer	center => null()
	geometrical centers More...
real, dimension(:,:,:,:), pointer	bcenter => null()
	bary centers More...
real, dimension(:,:,:,:), pointer	bccart => null()
	cartesian bary centers More...
real, dimension(:,:,:,:,:), pointer	fccart => null()
	cartesian face centered positions More...
real, dimension(:,:,:,:,:), pointer	ccart => null()
	cartesian corner positions More...
line, area and volume elements
type(marray_base)	dlx
type(marray_base)	dly
type(marray_base)	dlz
	cell centered line elements More...
type(marray_base)	volume
	cell volumes More...
type(marray_base)	dxdydv
type(marray_base)	dydzdv
type(marray_base)	dzdxdv
	dx/volume and dy/volume More...
real, dimension(:,:,:,:), pointer	dax
real, dimension(:,:,:,:), pointer	day
real, dimension(:,:,:,:), pointer	daz
	cell surface area elements More...
real, dimension(:,:,:,:), pointer	daxdydz
real, dimension(:,:,:,:), pointer	daydzdx
real, dimension(:,:,:,:), pointer	dazdxdy
	dAx/dydz, dAy/dxdz and dAz/dxdy More...
scale factors and related quantities
type(marray_cellscalar)	hx
type(marray_cellscalar)	hy
type(marray_cellscalar)	hz
	scale factors More...
type(marray_cellscalar)	sqrtg
	sqrt(det(metric)) More...
type(marray_cellscalar)	cyxy
type(marray_cellscalar)	cyzy
type(marray_cellscalar)	cxzx
type(marray_cellscalar)	cxyx
type(marray_cellscalar)	czxz
type(marray_cellscalar)	czyz
	commutator coefficients More...
radius and curvilinear position vector
type(marray_cellscalar)	radius
	real distance to coordinate origin More...
type(marray_cellvector)	posvec
	curvilinear position vector More...
other geometrial quantities
real, dimension(:,:,:), pointer	rotation => null()
	rotation angle of local curvilinear orthonormal frames More...
real, dimension(:,:,:,:,:,:), pointer	weights => null()
	interpolation weights More...

Variables in Parallel Mode
integer	maxinum
integer	maxjnum
integer	maxknum
	max. of local INUM,JNUM More...
integer	mininum
integer	minjnum
integer	minknum
	min. of local INUM,JNUM More...
integer	comm_cart
	cartesian communicator More...
integer	icomm
integer	jcomm
integer	kcomm
	communicators for cartesian rows and cols More...
integer, dimension(nfaces(3))	comm_boundaries
	communicators for boundary processes More...
integer, dimension(nfaces(3))	rank0_boundaries
	map rank0 -> world rank More...
integer, dimension(nfaces(3))	neighbor
	ranks of neighbor proc. More...
integer, dimension(3)	dims
	dimensions of cart comm More...
integer, dimension(3)	mycoords
	par. proc coordinates More...
PROCEDURE	remapbounds_1
PROCEDURE	remapbounds_2
PROCEDURE	remapbounds_3
PROCEDURE	remapbounds_4
GENERIC	remapbounds => remapbounds_1, remapbounds_2, remapbounds_3, remapbounds_4
PROCEDURE	initmesh
PROCEDURE	finalize_base
PROCEDURE(Finalize), deferred	finalize
PROCEDURE	internalpoint
PROCEDURE(TensorDivergence3D), deferred	tensordivergence3d
PROCEDURE(VectorDivergence3D), deferred	vectordivergence3d
PROCEDURE(TensorDivergence2D_1), deferred	tensordivergence2d_1
PROCEDURE(VectorDivergence2D_1), deferred	vectordivergence2d_1
GENERIC	divergence => tensordivergence3d, vectordivergence3d, vectordivergence2d_1, tensordivergence2d_1

Additional Inherited Members
Public Attributes inherited from logging_base_mod::logging_base
integer, public	err
	error code More...

Detailed Description

mesh data structure

Definition at line 122 of file mesh_base.f90.

Member Function/Subroutine Documentation

divergence()

GENERIC mesh_base_mod::mesh_base::divergence

private

Definition at line 214 of file mesh_base.f90.

finalize()

PROCEDURE (Finalize), deferred mesh_base_mod::mesh_base::finalize

private

Definition at line 208 of file mesh_base.f90.

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finalize_base()

PROCEDURE mesh_base_mod::mesh_base::finalize_base

private

Definition at line 207 of file mesh_base.f90.

initmesh()

PROCEDURE mesh_base_mod::mesh_base::initmesh

private

Definition at line 206 of file mesh_base.f90.

internalpoint()

PROCEDURE mesh_base_mod::mesh_base::internalpoint

private

Definition at line 209 of file mesh_base.f90.

remapbounds()

GENERIC mesh_base_mod::mesh_base::remapbounds

private

Definition at line 205 of file mesh_base.f90.

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remapbounds_1()

PROCEDURE mesh_base_mod::mesh_base::remapbounds_1

private

Definition at line 201 of file mesh_base.f90.

remapbounds_2()

PROCEDURE mesh_base_mod::mesh_base::remapbounds_2

private

Definition at line 202 of file mesh_base.f90.

remapbounds_3()

PROCEDURE mesh_base_mod::mesh_base::remapbounds_3

private

Definition at line 203 of file mesh_base.f90.

remapbounds_4()

PROCEDURE mesh_base_mod::mesh_base::remapbounds_4

private

Definition at line 204 of file mesh_base.f90.

tensordivergence2d_1()

PROCEDURE (TensorDivergence2D_1), deferred mesh_base_mod::mesh_base::tensordivergence2d_1

private

Definition at line 212 of file mesh_base.f90.

tensordivergence3d()

PROCEDURE (TensorDivergence3D), deferred mesh_base_mod::mesh_base::tensordivergence3d

private

Definition at line 210 of file mesh_base.f90.

vectordivergence2d_1()

PROCEDURE (VectorDivergence2D_1), deferred mesh_base_mod::mesh_base::vectordivergence2d_1

private

Definition at line 213 of file mesh_base.f90.

vectordivergence3d()

PROCEDURE (VectorDivergence3D), deferred mesh_base_mod::mesh_base::vectordivergence3d

private

Definition at line 211 of file mesh_base.f90.

Member Data Documentation

bccart

real, dimension(:,:,:,:), pointer mesh_base_mod::mesh_base::bccart => null()

private

cartesian bary centers

Definition at line 157 of file mesh_base.f90.

bcenter

real, dimension(:,:,:,:), pointer mesh_base_mod::mesh_base::bcenter => null()

private

bary centers

Definition at line 157 of file mesh_base.f90.

cart

type(marray_cellvector) mesh_base_mod::mesh_base::cart

private

cartesian coordinates

Definition at line 155 of file mesh_base.f90.

ccart

real, dimension(:,:,:,:,:), pointer mesh_base_mod::mesh_base::ccart => null()

private

cartesian corner positions

Definition at line 161 of file mesh_base.f90.

center

real, dimension(:,:,:,:), pointer mesh_base_mod::mesh_base::center => null()

private

geometrical centers

Definition at line 157 of file mesh_base.f90.

comm_boundaries

integer, dimension(nfaces(3)) mesh_base_mod::mesh_base::comm_boundaries

private

communicators for boundary processes

Definition at line 194 of file mesh_base.f90.

comm_cart

integer mesh_base_mod::mesh_base::comm_cart

private

cartesian communicator

Definition at line 191 of file mesh_base.f90.

curv

type(marray_cellvector) mesh_base_mod::mesh_base::curv

private

curvilinear coordinates

Definition at line 155 of file mesh_base.f90.

cxyx

type(marray_cellscalar) mesh_base_mod::mesh_base::cxyx

private

Definition at line 174 of file mesh_base.f90.

cxzx

type(marray_cellscalar) mesh_base_mod::mesh_base::cxzx

private

Definition at line 174 of file mesh_base.f90.

cyxy

type(marray_cellscalar) mesh_base_mod::mesh_base::cyxy

private

Definition at line 174 of file mesh_base.f90.

cyzy

type(marray_cellscalar) mesh_base_mod::mesh_base::cyzy

private

Definition at line 174 of file mesh_base.f90.

czxz

type(marray_cellscalar) mesh_base_mod::mesh_base::czxz

private

Definition at line 174 of file mesh_base.f90.

czyz

type(marray_cellscalar) mesh_base_mod::mesh_base::czyz

private

commutator coefficients

Definition at line 174 of file mesh_base.f90.

dax

real, dimension(:,:,:,:), pointer mesh_base_mod::mesh_base::dax

private

Definition at line 169 of file mesh_base.f90.

daxdydz

real, dimension(:,:,:,:), pointer mesh_base_mod::mesh_base::daxdydz

private

Definition at line 169 of file mesh_base.f90.

day

real, dimension(:,:,:,:), pointer mesh_base_mod::mesh_base::day

private

Definition at line 169 of file mesh_base.f90.

daydzdx

real, dimension(:,:,:,:), pointer mesh_base_mod::mesh_base::daydzdx

private

Definition at line 169 of file mesh_base.f90.

daz

real, dimension(:,:,:,:), pointer mesh_base_mod::mesh_base::daz

private

cell surface area elements

Definition at line 169 of file mesh_base.f90.

dazdxdy

real, dimension(:,:,:,:), pointer mesh_base_mod::mesh_base::dazdxdy

private

dAx/dydz, dAy/dxdz and dAz/dxdy

Definition at line 169 of file mesh_base.f90.

dims

integer, dimension(3) mesh_base_mod::mesh_base::dims

private

dimensions of cart comm

Definition at line 197 of file mesh_base.f90.

dlx

type(marray_base) mesh_base_mod::mesh_base::dlx

private

Definition at line 166 of file mesh_base.f90.

dly

type(marray_base) mesh_base_mod::mesh_base::dly

private

Definition at line 166 of file mesh_base.f90.

dlz

type(marray_base) mesh_base_mod::mesh_base::dlz

private

cell centered line elements

Definition at line 166 of file mesh_base.f90.

dx

real mesh_base_mod::mesh_base::dx

private

Definition at line 145 of file mesh_base.f90.

dxdydv

type(marray_base) mesh_base_mod::mesh_base::dxdydv

private

Definition at line 166 of file mesh_base.f90.

dy

real mesh_base_mod::mesh_base::dy

private

Definition at line 145 of file mesh_base.f90.

dydzdv

type(marray_base) mesh_base_mod::mesh_base::dydzdv

private

Definition at line 166 of file mesh_base.f90.

dz

real mesh_base_mod::mesh_base::dz

private

curvilinear spatial differences

Definition at line 145 of file mesh_base.f90.

dzdxdv

type(marray_base) mesh_base_mod::mesh_base::dzdxdv

private

dx/volume and dy/volume

Definition at line 166 of file mesh_base.f90.

fargo

type(fargo_base) mesh_base_mod::mesh_base::fargo

private

fargo transport properties

Definition at line 125 of file mesh_base.f90.

fccart

real, dimension(:,:,:,:,:), pointer mesh_base_mod::mesh_base::fccart => null()

private

cartesian face centered positions

Definition at line 161 of file mesh_base.f90.

geometry

class(geometry_base), allocatable mesh_base_mod::mesh_base::geometry

private

geometrical properties

Definition at line 124 of file mesh_base.f90.

ginum

integer mesh_base_mod::mesh_base::ginum

private

Definition at line 128 of file mesh_base.f90.

gjnum

integer mesh_base_mod::mesh_base::gjnum

private

Definition at line 128 of file mesh_base.f90.

gknum

integer mesh_base_mod::mesh_base::gknum

private

number of ghost cells in any direction

Definition at line 128 of file mesh_base.f90.

gnum

integer mesh_base_mod::mesh_base::gnum

private

number of ghost cells

Definition at line 127 of file mesh_base.f90.

hx

type(marray_cellscalar) mesh_base_mod::mesh_base::hx

private

Definition at line 174 of file mesh_base.f90.

hy

type(marray_cellscalar) mesh_base_mod::mesh_base::hy

private

Definition at line 174 of file mesh_base.f90.

hz

type(marray_cellscalar) mesh_base_mod::mesh_base::hz

private

scale factors

Definition at line 174 of file mesh_base.f90.

icomm

integer mesh_base_mod::mesh_base::icomm

private

Definition at line 192 of file mesh_base.f90.

igmax

integer mesh_base_mod::mesh_base::igmax

private

minimal & maximal index in x-direction with ghost cells

Definition at line 133 of file mesh_base.f90.

igmin

integer mesh_base_mod::mesh_base::igmin

private

Definition at line 133 of file mesh_base.f90.

im1

integer mesh_base_mod::mesh_base::im1

private

Definition at line 139 of file mesh_base.f90.

im2

integer mesh_base_mod::mesh_base::im2

private

access indices, which might become zero without x-dim

Definition at line 139 of file mesh_base.f90.

imax

integer mesh_base_mod::mesh_base::imax

private

minimal & maximal index in x-direction

Definition at line 130 of file mesh_base.f90.

imin

integer mesh_base_mod::mesh_base::imin

private

Definition at line 130 of file mesh_base.f90.

inum

integer mesh_base_mod::mesh_base::inum

private

Definition at line 129 of file mesh_base.f90.

invdx

real mesh_base_mod::mesh_base::invdx

private

Definition at line 146 of file mesh_base.f90.

invdy

real mesh_base_mod::mesh_base::invdy

private

Definition at line 146 of file mesh_base.f90.

invdz

real mesh_base_mod::mesh_base::invdz

private

inverse of curvilinear spatial differences

Definition at line 146 of file mesh_base.f90.

ip1

integer mesh_base_mod::mesh_base::ip1

private

Definition at line 139 of file mesh_base.f90.

ip2

integer mesh_base_mod::mesh_base::ip2

private

Definition at line 139 of file mesh_base.f90.

jcomm

integer mesh_base_mod::mesh_base::jcomm

private

Definition at line 192 of file mesh_base.f90.

jgmax

integer mesh_base_mod::mesh_base::jgmax

private

minimal & maximal index in y-direction with ghost cells

Definition at line 134 of file mesh_base.f90.

jgmin

integer mesh_base_mod::mesh_base::jgmin

private

Definition at line 134 of file mesh_base.f90.

jm1

integer mesh_base_mod::mesh_base::jm1

private

Definition at line 140 of file mesh_base.f90.

jm2

integer mesh_base_mod::mesh_base::jm2

private

access indices, which might become zero without y-dim

Definition at line 140 of file mesh_base.f90.

jmax

integer mesh_base_mod::mesh_base::jmax

private

minimal & maximal index in y-direction

Definition at line 131 of file mesh_base.f90.

jmin

integer mesh_base_mod::mesh_base::jmin

private

Definition at line 131 of file mesh_base.f90.

jnum

integer mesh_base_mod::mesh_base::jnum

private

Definition at line 129 of file mesh_base.f90.

jp1

integer mesh_base_mod::mesh_base::jp1

private

Definition at line 140 of file mesh_base.f90.

jp2

integer mesh_base_mod::mesh_base::jp2

private

Definition at line 140 of file mesh_base.f90.

kcomm

integer mesh_base_mod::mesh_base::kcomm

private

communicators for cartesian rows and cols

Definition at line 192 of file mesh_base.f90.

kgmax

integer mesh_base_mod::mesh_base::kgmax

private

minimal & maximal index in z-direction with ghost cells

Definition at line 135 of file mesh_base.f90.

kgmin

integer mesh_base_mod::mesh_base::kgmin

private

Definition at line 135 of file mesh_base.f90.

km1

integer mesh_base_mod::mesh_base::km1

private

Definition at line 141 of file mesh_base.f90.

km2

integer mesh_base_mod::mesh_base::km2

private

access indices, which might become zero without z-dim

Definition at line 141 of file mesh_base.f90.

kmax

integer mesh_base_mod::mesh_base::kmax

private

minimal & maximal index in z-direction

Definition at line 132 of file mesh_base.f90.

kmin

integer mesh_base_mod::mesh_base::kmin

private

Definition at line 132 of file mesh_base.f90.

knum

integer mesh_base_mod::mesh_base::knum

private

resolution

Definition at line 129 of file mesh_base.f90.

kp1

integer mesh_base_mod::mesh_base::kp1

private

Definition at line 141 of file mesh_base.f90.

kp2

integer mesh_base_mod::mesh_base::kp2

private

Definition at line 141 of file mesh_base.f90.

maxinum

integer mesh_base_mod::mesh_base::maxinum

private

Definition at line 189 of file mesh_base.f90.

maxjnum

integer mesh_base_mod::mesh_base::maxjnum

private

Definition at line 189 of file mesh_base.f90.

maxknum

integer mesh_base_mod::mesh_base::maxknum

private

max. of local INUM,JNUM

Definition at line 189 of file mesh_base.f90.

mininum

integer mesh_base_mod::mesh_base::mininum

private

Definition at line 190 of file mesh_base.f90.

minjnum

integer mesh_base_mod::mesh_base::minjnum

private

Definition at line 190 of file mesh_base.f90.

minknum

integer mesh_base_mod::mesh_base::minknum

private

min. of local INUM,JNUM

Definition at line 190 of file mesh_base.f90.

mycoords

integer, dimension(3) mesh_base_mod::mesh_base::mycoords

private

par. proc coordinates

Definition at line 198 of file mesh_base.f90.

ncorners

integer mesh_base_mod::mesh_base::ncorners

private

amount of corners, 2 (1D), 4 (2D), 8 (3D)

Definition at line 138 of file mesh_base.f90.

ndims

integer mesh_base_mod::mesh_base::ndims

private

dimensionality of the mesh: 1 (1D), 2 (2D), 3 (3D)

Definition at line 136 of file mesh_base.f90.

neighbor

integer, dimension(nfaces(3)) mesh_base_mod::mesh_base::neighbor

private

ranks of neighbor proc.

Definition at line 196 of file mesh_base.f90.

nfaces

integer mesh_base_mod::mesh_base::nfaces

private

amount of faces, 2 (1D), 4 (2D), 6 (3D)

Definition at line 137 of file mesh_base.f90.

omega

real mesh_base_mod::mesh_base::omega

private

speed of the rotating frame of ref.

Definition at line 147 of file mesh_base.f90.

posvec

type(marray_cellvector) mesh_base_mod::mesh_base::posvec

private

curvilinear position vector

Definition at line 180 of file mesh_base.f90.

q

real mesh_base_mod::mesh_base::q

private

shearing parameter

Definition at line 148 of file mesh_base.f90.

radius

type(marray_cellscalar) mesh_base_mod::mesh_base::radius

private

real distance to coordinate origin

Definition at line 179 of file mesh_base.f90.

rank0_boundaries

integer, dimension(nfaces(3)) mesh_base_mod::mesh_base::rank0_boundaries

private

map rank0 -> world rank

Definition at line 195 of file mesh_base.f90.

rotation

real, dimension(:,:,:), pointer mesh_base_mod::mesh_base::rotation => null()

private

rotation angle of local curvilinear orthonormal frames

Definition at line 183 of file mesh_base.f90.

rotcent

real, dimension(3) mesh_base_mod::mesh_base::rotcent

private

center of the rotating frame of ref.

Definition at line 152 of file mesh_base.f90.

rotsym

integer mesh_base_mod::mesh_base::rotsym

private

assume rotational symmetry (> 0 enabled, contains index of azimuthal angle)

Definition at line 150 of file mesh_base.f90.

shear_dir

integer mesh_base_mod::mesh_base::shear_dir

private

Enables shearingbox with shear direction (0 disabled, 1 or 2 enabled)

Definition at line 149 of file mesh_base.f90.

sqrtg

type(marray_cellscalar) mesh_base_mod::mesh_base::sqrtg

private

sqrt(det(metric))

Definition at line 174 of file mesh_base.f90.

vector_components

integer mesh_base_mod::mesh_base::vector_components

private

enabled vector components

Definition at line 151 of file mesh_base.f90.

volume

type(marray_base) mesh_base_mod::mesh_base::volume

private

cell volumes

Definition at line 166 of file mesh_base.f90.

weights

real, dimension(:,:,:,:,:,:), pointer mesh_base_mod::mesh_base::weights => null()

private

interpolation weights

Definition at line 185 of file mesh_base.f90.

without_ghost_zones

type(selection_base) mesh_base_mod::mesh_base::without_ghost_zones

private

for masking part of comp. domain

Definition at line 126 of file mesh_base.f90.

xmax

real mesh_base_mod::mesh_base::xmax

private

spatial extent of computational domain in x-direction

Definition at line 142 of file mesh_base.f90.

xmin

real mesh_base_mod::mesh_base::xmin

private

Definition at line 142 of file mesh_base.f90.

ymax

real mesh_base_mod::mesh_base::ymax

private

spatial extent of computational domain in y-direction

Definition at line 143 of file mesh_base.f90.

ymin

real mesh_base_mod::mesh_base::ymin

private

Definition at line 143 of file mesh_base.f90.

zmax

real mesh_base_mod::mesh_base::zmax

private

spatial extent of computational domain in z-direction

Definition at line 144 of file mesh_base.f90.

zmin

real mesh_base_mod::mesh_base::zmin

private

Definition at line 144 of file mesh_base.f90.

---

The documentation for this type was generated from the following file:

• /home/webadmin/src/fosite/src/mesh/mesh_base.f90